| Gencode Reference Annotation For The Human And Mouse Genomes | 9 | 0.61 | 2019 |
| ggsashimi: Sashimi plot revised for browser- and annotation-independent splicing visualization. | 0 | 0.34 | 2018 |
| Scalable Design of Paired CRISPR Guide RNAs for Genomic Deletion. | 0 | 0.34 | 2017 |
| Ten Simple Rules on How to Organize a Scientific Retreat. | 1 | 0.38 | 2017 |
| SelenoDB 2.0: annotation of selenoprotein genes in animals and their genetic diversity in humans. | 0 | 0.34 | 2014 |
| Grape RNA-Seq analysis pipeline environment. | 5 | 0.54 | 2013 |
| Intron-centric estimation of alternative splicing from RNA-seq data. | 3 | 0.68 | 2013 |
| Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes. | 2 | 0.42 | 2010 |
| SECISaln, a web-based tool for the creation of structure-based alignments of eukaryotic SECIS elements | 1 | 0.40 | 2009 |
| CROC: finding chromosomal clusters in eukaryotic genomes. | 0 | 0.34 | 2009 |
| Exact Transcriptome Reconstruction from Short Sequence Reads | 18 | 3.32 | 2008 |
| Bubbles: alternative splicing events of arbitrary dimension in splicing graphs | 3 | 0.92 | 2008 |
| A General Definition And Nomenclature For Alternative Splicing Events | 16 | 1.86 | 2008 |
| Selenodb 1.0: A Database Of Selenoprotein Genes, Proteins And Secis Elements | 3 | 0.53 | 2008 |
| Interoperability with Moby 1.0--it's better than sharing your toothbrush! | 24 | 1.05 | 2008 |
| Multiple non-collinear TF-map alignments of promoter regions. | 17 | 0.54 | 2007 |
| BioMoby web services to support clustering of co-regulated genes based on similarity of promoter configurations. | 5 | 0.59 | 2007 |
| Abs: A Database Of Annotated Regulatory Binding Sites From Orthologous Promoters | 31 | 1.33 | 2006 |
| Transcription Factor Map Alignment Of Promoter Regions | 5 | 0.53 | 2006 |
| Gene finding in the chicken genome. | 25 | 0.70 | 2005 |
| Splice site identification by idlBNs. | 20 | 1.14 | 2004 |
| gff2aplot: Plotting sequence comparisons. | 3 | 0.55 | 2003 |
| gff2ps: visualizing genomic annotations. | 21 | 8.08 | 2000 |
| Assembling genes from predicted exons in linear time with dynamic programming. | 14 | 1.52 | 1998 |
| Three-dimensional modelling of human cytochrome P450 1A2 and its interaction with caffeine and MeIQ. | 1 | 0.40 | 1997 |
| Inferring Correlation Between Database Queries: Analysis of Protein Sequence Patterns | 4 | 0.85 | 1993 |
